NXF1

Across TCGA patient cohorts, NXF1 protein abundance is significantly associated with the RNA expression of many other genes, with 21,050 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible NXF1-associated genes across cancer lineages are ILF3, LIN9, and IPO9. Each is linked with NXF1 in more than 7 cancer types. Because this analysis shows association rather than direction, both NXF1-to-partner and partner-to-NXF1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, NXF1 versus ILF3 in UCEC, with a Pearson correlation of 0.40.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (NXF1→partner) and Y-score (partner→NXF1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
UCEC	ILF3 →	+0.660	+0.197	<.001	.005	3	8
UCEC	LIN9 →	+0.779	+0.192	.001	.002	3	8
HNSC	IPO9 →	+0.588	+0.161	.004	.001	3	8
BRCA	SNHG20 →	+0.594	+0.231	<.001	.001	3	8
UCEC	SNHG1 →	+0.697	+0.246	<.001	<.001	3	8
HNSC	MBTD1 →	+0.747	+0.244	<.001	<.001	3	7

Each partner links to its Q-omics profile. Showing the 6 strongest of 21,050 associations by consensus.

NXF1 vs ILF3 — UCEC

Explore this scatter interactively →