NUCB1-AS1

RNA — tumor vs normal
Tumor vs NormalRNABox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, NUCB1-AS1 RNA differs between tumor and matched normal tissue in 10 of 18 cancer types tested, making tumor–normal expression one of NUCB1-AS1’s most consistent transcriptional readouts.

The strongest signal is observed in kidney renal clear cell carcinoma (KIRC), where NUCB1-AS1 RNA is more highly expressed in tumor relative to normal tissue. In most cancer types NUCB1-AS1 is over-expressed in tumor, although a few such as PAAD and LUAD show the opposite, repressed pattern.

KIRC, BRCA, and KIRP are the cancer types where NUCB1-AS1 tumor–normal differential expression is most reproducible.

RNA tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in NUCB1-AS1 RNA (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.
LineageGenderStageFold-changepSampling consensus
KIRCAllII,III,IV+0.086.0036view →
BRCAAllII,III,IV+0.168.0064view →
KIRPAllIV+0.187.0103view →
PAADFemaleAll−0.220.0472view →
BLCAAllAll+0.217.0262view →
PRADAllAll+0.141.0292view →
HNSCMaleIII,IV+0.076.0322view →
LIHCAllAll+0.066.0142view →
READAllII,III,IV+0.422.0361view →
LUADFemaleII,III,IV−0.254.0431view →
Pink = over-expressed in tumor, green = repressed in tumor. Showing the 10 strongest of 10 lineages.

NUCB1-AS1–KIRC

Tumor-vs-normal expression box plot for NUCB1-AS1 RNA in KIRC.

Open the KIRC breakdown →

Exploration