NTRK3-AS1

Across TCGA patient cohorts, NTRK3-AS1 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,624 significant associations in total. STAD shows the largest number of these associations.

The most reproducible NTRK3-AS1-associated GO terms across cancer lineages are Positive regulation of DNA-templated transcription, elongation, Regulation of DNA-templated transcription initiation, and Transcription initiation at RNA polymerase II promoter. Each is linked with NTRK3-AS1 in more than 14 cancer types. Because this analysis shows association rather than direction, both NTRK3-AS1-to-partner and partner-to-NTRK3-AS1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Positive regulation of DNA-templated transcription, elongation grouped by NTRK3-AS1-low versus NTRK3-AS1-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (NTRK3-AS1→partner) and Y-score (partner→NTRK3-AS1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Positive regulation of DNA-templated transcription, elongation →	+0.084	+0.056	<.001	<.001	3	15
STAD	Regulation of DNA-templated transcription initiation →	+0.078	+0.060	<.001	<.001	3	14
STAD	Transcription initiation at RNA polymerase II promoter →	+0.075	+0.065	<.001	<.001	3	14
STAD	Obsolete histone modification →	+0.074	+0.058	<.001	<.001	3	14
STAD	Obsolete histone methylation →	+0.073	+0.054	<.001	<.001	3	14
STAD	Regulation of transcription elongation by RNA polymerase II →	+0.081	+0.056	<.001	<.001	3	14

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,624 associations by consensus.

Positive regulation of DNA-templated transcription, elongation by NTRK3-AS1 expression — STAD

Explore this box plot interactively →