NT5DC4

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, NT5DC4 RNA expression is significantly associated with the protein abundance of many other proteins, with 8,809 significant associations in total. BRCA shows the largest number of these associations.

The most reproducible NT5DC4-associated proteins across cancer lineages are LCP1, LCP2, and PTPN6. Each is linked with NT5DC4 in more than 6 cancer types. Because this analysis shows association rather than direction, both NT5DC4-to-partner and partner-to-NT5DC4 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, NT5DC4 versus LCP1 in GBM, with a Pearson correlation of 0.46.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (NT5DC4→partner) and Y-score (partner→NT5DC4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMLCP1 →+0.801+0.141<.001<.00137
LSCCLCP2 →+0.488+0.278<.001.00337
GBMPTPN6 →+0.573+0.135<.001<.00136
BRCATHEMIS2 →+0.392+0.196<.001<.00136
GBMTNFAIP8 →+0.546+0.097.002<.00136
UCECNCKAP1L →+0.696+0.539<.001.00236
Each partner links to its Q-omics profile. Showing the 6 strongest of 8,809 associations by consensus.

NT5DC4 vs LCP1 — GBM

Per-sample scatter of NT5DC4 vs LCP1 in GBM (Pearson r = 0.46).

Explore this scatter interactively →

Exploration