NT5DC3

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, NT5DC3 mutation is significantly associated with the RNA expression of many other genes, with 3,405 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible NT5DC3-associated genes across cancer lineages are RNA5SP422, RNA5SP411, and KIF23. Each is linked with NT5DC3 in more than 2 cancer types. Because this analysis shows association rather than direction, both NT5DC3-to-partner and partner-to-NT5DC3 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RNA5SP422 grouped by NT5DC3-low versus NT5DC3-high in LUSC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (NT5DC3→partner) and Y-score (partner→NT5DC3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUSCRNA5SP422 →+0.423+4.733.003.00433
LUSCRNA5SP411 →+0.564+4.733<.001.00433
UCECKIF23 →+0.563+3.480.003.00233
UCECSNRPD1 →+0.467+2.212<.001<.00133
CESCOR51A8P →+0.090+5.539.009.00432
KIRCPGAM1P13 →+0.058+5.509<.001.00432
Each partner links to its Q-omics profile. Showing the 6 strongest of 3,405 associations by consensus.

RNA5SP422 by NT5DC3 expression — LUSC

Box plot of RNA5SP422 in NT5DC3-low vs NT5DC3-high samples in LUSC.

Explore this box plot interactively →

Exploration