NT5C2

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, NT5C2 mutation is significantly associated with the RNA expression of many other genes, with 352 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible NT5C2-associated genes across cancer lineages are AVP, CDH20, and STXBP3. Each is linked with NT5C2 in more than 1 cancer types. Because this analysis shows association rather than direction, both NT5C2-to-partner and partner-to-NT5C2 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, AVP grouped by NT5C2-low versus NT5C2-high in BLOOD_Lymphoma.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (NT5C2→partner) and Y-score (partner→NT5C2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLOOD_LymphomaAVP →+0.031+5.209<.001.00531
LARGE_INTESTINECDH20 →+0.081+3.444.002<.00131
LARGE_INTESTINESTXBP3 →+0.553+3.212<.001.00631
LARGE_INTESTINERCN2 →+0.674+3.212<.001.00631
LARGE_INTESTINECCNI →+0.569+3.299.005.00431
LARGE_INTESTINEALDH6A1 →+1.014+3.212.001.00631
Each partner links to its Q-omics profile. Showing the 6 strongest of 352 associations by consensus.

AVP by NT5C2 expression — BLOOD_Lymphoma

Box plot of AVP in NT5C2-low vs NT5C2-high samples in BLOOD_Lymphoma.

Explore this box plot interactively →

Exploration