NRN1

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, NRN1 mutation is significantly associated with the RNA expression of many other genes, with 8 significant associations in total. OESOPHAGUS shows the largest number of these associations.

The most reproducible NRN1-associated genes across cancer lineages are CCDC185, C9orf92, and CRYBB1. Each is linked with NRN1 in more than 1 cancer types. Because this analysis shows association rather than direction, both NRN1-to-partner and partner-to-NRN1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, CCDC185 grouped by NRN1-low versus NRN1-high in SOFT_TISSUE.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (NRN1→partner) and Y-score (partner→NRN1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
SOFT_TISSUECCDC185 →+0.048+4.635<.001.00331
SOFT_TISSUEC9orf92 →+0.144+4.369<.001.00831
OESOPHAGUSCRYBB1 →+0.026+4.906<.001.00631
OESOPHAGUSKHDRBS2 →+0.603+4.906<.001.00631
OESOPHAGUSGPR26 →+0.036+4.906<.001.00631
OESOPHAGUSC10orf71 →+0.006+4.906<.001.00631
Each partner links to its Q-omics profile. Showing the 6 strongest of 8 associations by consensus.

CCDC185 by NRN1 expression — SOFT_TISSUE

Box plot of CCDC185 in NRN1-low vs NRN1-high samples in SOFT_TISSUE.

Explore this box plot interactively →

Exploration