NRM

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, NRM mutation is significantly associated with the RNA expression of many other genes, with 2 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible NRM-associated genes across cancer lineages are DEFA1B and SERPINB13. Each is linked with NRM in more than 1 cancer types. Because this analysis shows association rather than direction, both NRM-to-partner and partner-to-NRM results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, DEFA1B grouped by NRM-low versus NRM-high in BLOOD_Leukemia.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (NRM→partner) and Y-score (partner→NRM) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLOOD_LeukemiaDEFA1B →+2.239+3.922<.001.00231
BLOOD_LeukemiaSERPINB13 →+0.053+3.696<.001.00611
Each partner links to its Q-omics profile. Showing the 2 strongest of 2 associations by consensus.

DEFA1B by NRM expression — BLOOD_Leukemia

Box plot of DEFA1B in NRM-low vs NRM-high samples in BLOOD_Leukemia.

Explore this box plot interactively →

Exploration