NR1I2

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, NR1I2 mutation is significantly associated with the RNA expression of many other genes, with 3,287 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible NR1I2-associated genes across cancer lineages are RNU6-487P, C4orf36, and BAP1. Each is linked with NR1I2 in more than 1 cancer types. Because this analysis shows association rather than direction, both NR1I2-to-partner and partner-to-NR1I2 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RNU6-487P grouped by NR1I2-low versus NR1I2-high in COAD.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (NR1I2→partner) and Y-score (partner→NR1I2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
COADRNU6-487P →+0.289+4.807<.001.00432
UCECC4orf36 →+0.296+3.617.003.00132
UCECBAP1 →+0.370+3.008.001<.00132
UCECLRR1 →+0.569+2.584.002.00132
UCECGHITM →+0.785+3.247<.001<.00132
UCECENTR1 →+0.507+2.923<.001<.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 3,287 associations by consensus.

RNU6-487P by NR1I2 expression — COAD

Box plot of RNU6-487P in NR1I2-low vs NR1I2-high samples in COAD.

Explore this box plot interactively →

Exploration