NPR2

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, NPR2 mutation is significantly associated with the RNA expression of many other genes, with 4,674 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible NPR2-associated genes across cancer lineages are ASF1B, EMC7, and TIMM29. Each is linked with NPR2 in more than 3 cancer types. Because this analysis shows association rather than direction, both NPR2-to-partner and partner-to-NPR2 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, ASF1B grouped by NPR2-low versus NPR2-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (NPR2→partner) and Y-score (partner→NPR2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECASF1B →+0.495+2.055.002<.00134
UCECEMC7 →+0.455+2.076<.001<.00134
UCECTIMM29 →+0.324+1.653<.001<.00134
COADUFD1 →+0.411+2.598<.001.00634
COADANKRD39 →+0.308+3.200.008.00933
COADRAET1K →+0.604+3.469<.001.00233
Each partner links to its Q-omics profile. Showing the 6 strongest of 4,674 associations by consensus.

ASF1B by NPR2 expression — UCEC

Box plot of ASF1B in NPR2-low vs NPR2-high samples in UCEC.

Explore this box plot interactively →

Exploration