NPIPA2

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, NPIPA2 mutation is significantly associated with the RNA expression of many other genes, with 16 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible NPIPA2-associated genes across cancer lineages are NUS1P4, MRPL32P1, and RN7SKP181. Each is linked with NPIPA2 in more than 1 cancer types. Because this analysis shows association rather than direction, both NPIPA2-to-partner and partner-to-NPIPA2 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, NUS1P4 grouped by NPIPA2-low versus NPIPA2-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (NPIPA2→partner) and Y-score (partner→NPIPA2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECNUS1P4 →+0.208+5.186<.001.00731
UCECMRPL32P1 →+0.587+5.694<.001.00331
UCECRN7SKP181 →+0.423+5.133<.001.00831
UCECRAD23BP2 →+0.107+4.982<.001.00931
UCECYRDCP3 →+0.380+5.420<.001.00531
UCECKRTAP8-2P →+0.516+5.937<.001.00231
Each partner links to its Q-omics profile. Showing the 6 strongest of 16 associations by consensus.

NUS1P4 by NPIPA2 expression — UCEC

Box plot of NUS1P4 in NPIPA2-low vs NPIPA2-high samples in UCEC.

Explore this box plot interactively →

Exploration