NPHP3-AS1

Across TCGA patient cohorts, NPHP3-AS1 RNA expression is significantly associated with the go_rna of many other GO terms, with 7,039 significant associations in total. STAD shows the largest number of these associations.

The most reproducible NPHP3-AS1-associated GO terms across cancer lineages are Regulation of organelle assembly, Nuclear export, and Peptidyl-lysine modification. Each is linked with NPHP3-AS1 in more than 23 cancer types. Because this analysis shows association rather than direction, both NPHP3-AS1-to-partner and partner-to-NPHP3-AS1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Regulation of organelle assembly grouped by NPHP3-AS1-low versus NPHP3-AS1-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (NPHP3-AS1→partner) and Y-score (partner→NPHP3-AS1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Regulation of organelle assembly →	+0.059	+0.064	<.001	<.001	3	23
STAD	Nuclear export →	+0.071	+0.066	<.001	<.001	3	23
STAD	Peptidyl-lysine modification →	+0.062	+0.068	<.001	<.001	3	23
KICH	Regulation of mRNA 3'-end processing →	+0.072	+0.085	<.001	<.001	2	24
ESCA	Regulation of cellular response to heat →	+0.077	+0.097	.001	.003	3	22
STAD	Golgi vesicle transport →	+0.072	+0.063	<.001	<.001	3	22

Each partner links to its Q-omics profile. Showing the 6 strongest of 7,039 associations by consensus.

Regulation of organelle assembly by NPHP3-AS1 expression — STAD

Explore this box plot interactively →