NPC1L1

Across TCGA patient cohorts, NPC1L1 mutation is significantly associated with the RNA expression of many other genes, with 6,547 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible NPC1L1-associated genes across cancer lineages are DPCD, UHRF1, and RPARP-AS1. Each is linked with NPC1L1 in more than 4 cancer types. Because this analysis shows association rather than direction, both NPC1L1-to-partner and partner-to-NPC1L1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, DPCD grouped by NPC1L1-low versus NPC1L1-high in COAD.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (NPC1L1→partner) and Y-score (partner→NPC1L1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
COAD	DPCD →	+0.408	+2.519	.006	.009	3	5
LUAD	UHRF1 →	+0.851	+3.357	.002	.004	3	4
COAD	RPARP-AS1 →	+0.425	+2.770	.001	.002	3	4
COAD	TPGS2 →	+0.612	+2.960	<.001	<.001	3	4
STAD	ZNF232 →	+0.513	+3.388	.004	.004	3	4
UCEC	SLC35B1 →	+0.376	+2.673	<.001	<.001	3	4

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,547 associations by consensus.

DPCD by NPC1L1 expression — COAD

Explore this box plot interactively →