NOP58

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, NOP58 RNA expression is significantly associated with the protein abundance of many other proteins, with 19,410 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible NOP58-associated proteins across cancer lineages are MCM6, MCM7, and UTP4. Each is linked with NOP58 in more than 8 cancer types. Because this analysis shows association rather than direction, both NOP58-to-partner and partner-to-NOP58 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, NOP58 versus MCM6 in LSCC, with a Pearson correlation of 0.62.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (NOP58→partner) and Y-score (partner→NOP58) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCMCM6 →+0.617+0.514<.001<.00139
LSCCMCM7 →+0.597+0.509<.001<.00139
UCECUTP4 →+0.396+0.625<.001<.00129
LUADWDR36 →+0.320+0.403<.001<.00138
PDACNCL_S67 →+0.797+0.309<.001.00338
LSCCORC3 →+0.373+0.570<.001<.00138
Each partner links to its Q-omics profile. Showing the 6 strongest of 19,410 associations by consensus.

NOP58 vs MCM6 — LSCC

Per-sample scatter of NOP58 vs MCM6 in LSCC (Pearson r = 0.62).

Explore this scatter interactively →

Exploration