NLRP12

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, NLRP12 mutation is significantly associated with the RNA expression of many other genes, with 166 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible NLRP12-associated genes across cancer lineages are NKX2-6, ACER1, and VWC2L. Each is linked with NLRP12 in more than 1 cancer types. Because this analysis shows association rather than direction, both NLRP12-to-partner and partner-to-NLRP12 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, NKX2-6 grouped by NLRP12-low versus NLRP12-high in BLOOD_Leukemia.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (NLRP12→partner) and Y-score (partner→NLRP12) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLOOD_LeukemiaNKX2-6 →+0.362+4.201<.001.00132
LARGE_INTESTINEACER1 →+0.065+2.394<.001<.00132
BLOOD_LeukemiaVWC2L →+0.013+3.339<.001.00632
BLOOD_LeukemiaTMEM26 →+0.875+3.623.001.00732
BLOOD_LeukemiaC13orf42 →+0.037+4.007<.001.00232
SOFT_TISSUEKRTAP17-1 →+0.019+4.369<.001.00831
Each partner links to its Q-omics profile. Showing the 6 strongest of 166 associations by consensus.

NKX2-6 by NLRP12 expression — BLOOD_Leukemia

Box plot of NKX2-6 in NLRP12-low vs NLRP12-high samples in BLOOD_Leukemia.

Explore this box plot interactively →

Exploration