NKX3-2

Across TCGA patient cohorts, NKX3-2 RNA expression is significantly associated with the RNA expression of many other genes, with 16,729 significant associations in total. TGCT shows the largest number of these associations.

The most reproducible NKX3-2-associated genes across cancer lineages are LINC01096, MAP3K4-AS1, and CD276. Each is linked with NKX3-2 in more than 29 cancer types. Because this analysis shows association rather than direction, both NKX3-2-to-partner and partner-to-NKX3-2 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, NKX3-2 versus LINC01096 in THYM, with a Pearson correlation of 0.96.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (NKX3-2→partner) and Y-score (partner→NKX3-2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
THYM	LINC01096 →	+1.756	+1.459	<.001	<.001	3	30
STAD	MAP3K4-AS1 →	+1.044	+1.175	<.001	<.001	3	26
THYM	CD276 →	+1.089	+1.067	<.001	<.001	3	26
OV	COL5A1 →	+2.197	+1.126	<.001	<.001	3	25
SARC	ADAM12 →	+1.938	+1.113	<.001	<.001	3	25
THYM	SERPINH1 →	+1.327	+1.357	<.001	<.001	3	25

Each partner links to its Q-omics profile. Showing the 6 strongest of 16,729 associations by consensus.

NKX3-2 vs LINC01096 — THYM

Explore this scatter interactively →