NKAPD1

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, NKAPD1 protein abundance is significantly associated with the RNA expression of many other genes, with 4,562 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible NKAPD1-associated genes across cancer lineages are WDR74, UBE4A, and CUL5. Each is linked with NKAPD1 in more than 3 cancer types. Because this analysis shows association rather than direction, both NKAPD1-to-partner and partner-to-NKAPD1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, NKAPD1 versus WDR74 in LSCC, with a Pearson correlation of 0.33.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (NKAPD1→partner) and Y-score (partner→NKAPD1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCWDR74 →+0.428+0.323.001.00234
HNSCUBE4A →+0.520+0.349<.001.00134
HNSCCUL5 →+0.444+0.323<.001<.00134
LSCCMRE11 →+0.512+0.332<.001.00134
HNSCZW10 →+0.594+0.387.002.00334
HNSCPUS3 →+0.536+0.304.001<.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 4,562 associations by consensus.

NKAPD1 vs WDR74 — LSCC

Per-sample scatter of NKAPD1 vs WDR74 in LSCC (Pearson r = 0.33).

Explore this scatter interactively →

Exploration