NIPSNAP2

Across TCGA cell cohorts, NIPSNAP2 protein abundance is significantly associated with the RNA expression of many other genes, with 3,080 significant associations in total. BLOOD_Lymphoma shows the largest number of these associations.

The most reproducible NIPSNAP2-associated genes across cancer lineages are CHCHD3, MPST, and ZFPM1. Each is linked with NIPSNAP2 in more than 2 cancer types. Because this analysis shows association rather than direction, both NIPSNAP2-to-partner and partner-to-NIPSNAP2 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, NIPSNAP2 versus CHCHD3 in KIDNEY, with a Pearson correlation of 0.83.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (NIPSNAP2→partner) and Y-score (partner→NIPSNAP2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
KIDNEY	CHCHD3 →	+0.585	+1.640	<.001	.006	3	3
LUNG_NSCLC_LUAD	MPST →	+0.903	+1.836	.001	.003	3	3
BLOOD_Lymphoma	ZFPM1 →	+0.855	+0.904	.001	.001	3	2
BLOOD_Lymphoma	ZSCAN5C →	+0.027	+0.898	.005	.002	3	2
PANCREAS	SLC12A6 →	-1.314	-1.488	.002	.007	3	2
BLOOD_Leukemia	USP14 →	-0.795	-1.648	.002	.006	3	2

Each partner links to its Q-omics profile. Showing the 6 strongest of 3,080 associations by consensus.

NIPSNAP2 vs CHCHD3 — KIDNEY

Explore this scatter interactively →