Across TCGA patient cohorts, NIPSNAP1 mutation is significantly associated with the RNA expression of many other genes, with 237 significant associations in total. SKCM shows the largest number of these associations.

The most reproducible NIPSNAP1-associated genes across cancer lineages are RN7SL248P, LINC02497, and RN7SKP46. Each is linked with NIPSNAP1 in more than 1 cancer types. Because this analysis shows association rather than direction, both NIPSNAP1-to-partner and partner-to-NIPSNAP1 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (NIPSNAP1→partner) and Y-score (partner→NIPSNAP1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
UCEC	RN7SL248P →	+0.118	+4.400	<.001	.006	3	2
COAD	LINC02497 →	+0.167	+4.418	<.001	.008	3	2
LUAD	RN7SKP46 →	+0.114	+7.930	<.001	.008	3	2
UCEC	LINC02079 →	+0.188	+4.811	<.001	<.001	3	2
SKCM	RNU6-141P →	+0.358	+2.739	<.001	.004	3	2
UCEC	TDGF1P1 →	+0.203	+4.835	<.001	<.001	3	2

Each partner links to its Q-omics profile. Showing the 6 strongest of 237 associations by consensus.

Exploration

NIPSNAP1 survival (RNA) · tumor vs normal (RNA) · all NIPSNAP1 data types