NINL

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, NINL mutation is significantly associated with the RNA expression of many other genes, with 346 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible NINL-associated genes across cancer lineages are P2RY12, RAB19, and GTF2A1L. Each is linked with NINL in more than 2 cancer types. Because this analysis shows association rather than direction, both NINL-to-partner and partner-to-NINL results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, P2RY12 grouped by NINL-low versus NINL-high in OVARY.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (NINL→partner) and Y-score (partner→NINL) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVARYP2RY12 →+0.031+4.029.001.00933
BLOOD_LeukemiaRAB19 →+0.396+3.711.006.00232
BLOOD_LeukemiaGTF2A1L →+0.082+3.534.006.00532
SKINPI4K2B →+0.577+3.302.002.00832
LARGE_INTESTINEGPR63 →+0.776+3.459<.001.00132
LARGE_INTESTINEPPP3CC →+0.674+2.588.004.00432
Each partner links to its Q-omics profile. Showing the 6 strongest of 346 associations by consensus.

P2RY12 by NINL expression — OVARY

Box plot of P2RY12 in NINL-low vs NINL-high samples in OVARY.

Explore this box plot interactively →

Exploration