NFX1

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, NFX1 mutation is significantly associated with the RNA expression of many other genes, with 29 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible NFX1-associated genes across cancer lineages are DEFB124, SCGB1C1, and CATSPER4. Each is linked with NFX1 in more than 1 cancer types. Because this analysis shows association rather than direction, both NFX1-to-partner and partner-to-NFX1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, DEFB124 grouped by NFX1-low versus NFX1-high in BLOOD_Lymphoma.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (NFX1→partner) and Y-score (partner→NFX1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLOOD_LymphomaDEFB124 →+0.111+3.927<.001.00431
BLOOD_LymphomaSCGB1C1 →+0.115+3.714<.001.00631
BLOOD_LymphomaCATSPER4 →+0.070+3.736<.001.00931
BLOOD_LymphomaOR52K1 →+0.019+5.584<.001<.00131
BLOOD_LymphomaSPATS1 →+0.748+3.714<.001.00631
BLOOD_LymphomaOR52E5 →+0.049+4.169<.001.00231
Each partner links to its Q-omics profile. Showing the 6 strongest of 29 associations by consensus.

DEFB124 by NFX1 expression — BLOOD_Lymphoma

Box plot of DEFB124 in NFX1-low vs NFX1-high samples in BLOOD_Lymphoma.

Explore this box plot interactively →

Exploration