NEUROD6

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, NEUROD6 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,819 significant associations in total. STAD shows the largest number of these associations.

The most reproducible NEUROD6-associated GO terms across cancer lineages are Establishment of protein localization to membrane, Peptide transport, and Mitochondrial membrane organization. Each is linked with NEUROD6 in more than 8 cancer types. Because this analysis shows association rather than direction, both NEUROD6-to-partner and partner-to-NEUROD6 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Establishment of protein localization to membrane grouped by NEUROD6-low versus NEUROD6-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (NEUROD6→partner) and Y-score (partner→NEUROD6) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
STADEstablishment of protein localization to membrane →+0.076+0.036<.001<.00139
STADPeptide transport →+0.048+0.038<.001<.00139
STADMitochondrial membrane organization →+0.086+0.035<.001<.00139
STADNegative regulation of protein localization →+0.072+0.037<.001<.00138
STADNegative regulation of establishment of protein localization →+0.064+0.037<.001<.00138
STADGlycerophospholipid biosynthetic process →+0.072+0.040<.001<.00138
Each partner links to its Q-omics profile. Showing the 6 strongest of 6,819 associations by consensus.

Establishment of protein localization to membrane by NEUROD6 expression — STAD

Box plot of Establishment of protein localization to membrane in NEUROD6-low vs NEUROD6-high samples in STAD.

Explore this box plot interactively →

Exploration