NEUROD6

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, NEUROD6 RNA expression is significantly associated with the go_rna of many other GO terms, with 1,874 significant associations in total. BONE shows the largest number of these associations.

The most reproducible NEUROD6-associated GO terms across cancer lineages are Negative regulation of cell activation, Actin crosslink formation, and Skeletal myofibril assembly. Each is linked with NEUROD6 in more than 3 cancer types. Because this analysis shows association rather than direction, both NEUROD6-to-partner and partner-to-NEUROD6 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Negative regulation of cell activation grouped by NEUROD6-low versus NEUROD6-high in BONE.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (NEUROD6→partner) and Y-score (partner→NEUROD6) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BONENegative regulation of cell activation →-0.067-3.698<.001<.00134
BONEActin crosslink formation →-0.177-3.048<.001.00124
LUNG_SCLCSkeletal myofibril assembly →-0.869-1.539<.001.00233
LUNG_SCLCPositive regulation of natural killer cell mediated cytotoxicity directed against tumor cell target →-0.650-1.796<.001.00233
BONEProtein targeting to vacuole involved in autophagy →-0.187-3.849<.001<.00133
BONENegative regulation of protein phosphorylation →-0.047-2.885<.001.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 1,874 associations by consensus.

Negative regulation of cell activation by NEUROD6 expression — BONE

Box plot of Negative regulation of cell activation in NEUROD6-low vs NEUROD6-high samples in BONE.

Explore this box plot interactively →

Exploration