NEFM

Across TCGA patient cohorts, NEFM RNA expression is significantly associated with the protein abundance of many other proteins, with 14,571 significant associations in total. GBM shows the largest number of these associations.

The most reproducible NEFM-associated proteins across cancer lineages are MAP1LC3A, SGCD, and CACNA2D1. Each is linked with NEFM in more than 3 cancer types. Because this analysis shows association rather than direction, both NEFM-to-partner and partner-to-NEFM results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, NEFM versus MAP1LC3A in LSCC, with a Pearson correlation of 0.42.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (NEFM→partner) and Y-score (partner→NEFM) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LSCC	MAP1LC3A →	+0.602	+0.389	.001	.008	3	4
BRCA	SGCD →	+0.872	+0.314	<.001	<.001	3	4
GBM	CACNA2D1 →	+0.622	+0.964	<.001	<.001	3	4
UCEC	ATL1 →	+0.672	+1.479	<.001	<.001	3	4
UCEC	PTGES3 →	-0.262	-1.222	.002	<.001	3	3
GBM	PUS7_S90 →	-0.751	-1.435	.003	.001	3	3

Each partner links to its Q-omics profile. Showing the 6 strongest of 14,571 associations by consensus.

NEFM vs MAP1LC3A — LSCC

Explore this scatter interactively →