NEFH

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, NEFH RNA expression is significantly associated with the go_rna of many other GO terms, with 3,081 significant associations in total. BONE shows the largest number of these associations.

The most reproducible NEFH-associated GO terms across cancer lineages are Postsynaptic intermediate filament cytoskeleton organization, Regulation of telomerase RNA localization to Cajal body, and Neurofilament bundle assembly. Each is linked with NEFH in more than 10 cancer types. Because this analysis shows association rather than direction, both NEFH-to-partner and partner-to-NEFH results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Postsynaptic intermediate filament cytoskeleton organization grouped by NEFH-low versus NEFH-high in LUNG_NSCLC_LUAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (NEFH→partner) and Y-score (partner→NEFH) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUNG_NSCLC_LUADPostsynaptic intermediate filament cytoskeleton organization →+1.414+2.557<.001<.001311
BONERegulation of telomerase RNA localization to Cajal body →+0.102+3.380.006.002310
BONENeurofilament bundle assembly →+1.721+3.463<.001<.001310
LARGE_INTESTINENucleic acid catabolic process →+0.038+0.073<.001<.00139
OVARYNuclear RNA surveillance →+0.068+1.936<.001.00338
LUNG_SCLCCytokinesis →+0.079+2.602<.001<.00137
Each partner links to its Q-omics profile. Showing the 6 strongest of 3,081 associations by consensus.

Postsynaptic intermediate filament cytoskeleton organization by NEFH expression — LUNG_NSCLC_LUAD

Box plot of Postsynaptic intermediate filament cytoskeleton organization in NEFH-low vs NEFH-high samples in LUNG_NSCLC_LUAD.

Explore this box plot interactively →

Exploration