NEDD4

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, NEDD4 mutation is significantly associated with the total protein of many other genes, with 55 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible NEDD4-associated genes across cancer lineages are FASN, eIF4E, and 14-3-3_epsilon. Each is linked with NEDD4 in more than 3 cancer types. Because this analysis shows association rather than direction, both NEDD4-to-partner and partner-to-NEDD4 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, FASN grouped by NEDD4-low versus NEDD4-high in LUAD.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (NEDD4→partner) and Y-score (partner→NEDD4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUADFASN →+0.478+3.000.040.03534
COADeIF4E →+0.177+2.025.014.01732
COAD14-3-3_epsilon →+0.104+2.195.044.03232
COADShc_pY317 →-0.154-2.983.023.03432
COADTSC1 →-0.429-2.459<.001.01732
COADASNS →+0.652+2.008<.001.01832
Each partner links to its Q-omics profile. Showing the 6 strongest of 55 associations by consensus.

FASN by NEDD4 expression — LUAD

Box plot of FASN in NEDD4-low vs NEDD4-high samples in LUAD.

Explore this box plot interactively →

Exploration