NDN

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, NDN protein abundance is significantly associated with the RNA expression of many other genes, with 5,907 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible NDN-associated genes across cancer lineages are FGF7, FILIP1L, and RCAN2. Each is linked with NDN in more than 4 cancer types. Because this analysis shows association rather than direction, both NDN-to-partner and partner-to-NDN results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, NDN versus FGF7 in OV, with a Pearson correlation of 0.52.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (NDN→partner) and Y-score (partner→NDN) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVFGF7 →+2.198+0.870<.001.00935
BRCAFILIP1L →+1.254+0.682<.001.00135
GBMRCAN2 →+1.490+0.694.001.00135
OVMRGPRF →+1.265+1.544<.001<.00135
OVCOL15A1 →+1.459+1.120<.001<.00135
OVCYS1 →+1.584+0.899.002.00835
Each partner links to its Q-omics profile. Showing the 6 strongest of 5,907 associations by consensus.

NDN vs FGF7 — OV

Per-sample scatter of NDN vs FGF7 in OV (Pearson r = 0.52).

Explore this scatter interactively →

Exploration