NDN

RNA & survival
SurvivalRNAKaplan–Meier · TCGA cohorts

Across TCGA pan-cancer cohorts, NDN RNA is linked to patient survival in 21 of 34 cancer types, making it the most broadly survival-associated NDN data layer compared with 11 for mutation status and 4 for mass-spec protein.

The strongest signal is observed in uveal melanoma (UVM), where higher NDN RNA is associated with better overall survival. In most high-consensus cancer types, elevated NDN expression acts as an unfavorable survival marker, although some lineages such as UVM and UCEC show a favorable association.

UVM, UCEC, and LGG are the cancer types where NDN RNA most reproducibly stratifies survival.

RNA survival associations by lineage

Ranked by sampling consensus. AUC1 and AUC2 indicate survival in the high- and low-expression groups, respectively; the lower AUC marks the poorer-surviving group. p-values are from the log-rank test.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
UVMOSMedianAll0.8030.403<.001132view →
UCECDFSTertileII,III,IV0.8960.777.00358view →
LGGOSMedianAll0.8650.751<.00140view →
SKCMOSTertileIII,IV0.5650.833<.00130view →
OVOSQuartileIV0.9420.575.00616view →
THCADFSMedianAll0.9070.767.00111view →
SCLCDFSQuartileAll0.4000.107.02410view →
STADOSTertileAll0.5350.669.00910view →
KIRPDFSQuartileAll0.8170.933.0109view →
ACCOSMedianIV0.3440.724.0388view →
MESOOSTertileAll0.4660.265.0177view →
LUADOSTertileII,III,IV0.5960.459.0286view →
Pink = unfavorable, green = favorable. Showing the 12 strongest of 21 lineages.

NDN–UVM (OS)

Kaplan–Meier survival curve for NDN RNA-high vs -low samples in UVM.

Open the UVM breakdown →

Exploration