NDEL1

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, NDEL1 mutation is significantly associated with the total protein of many other genes, with 33 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible NDEL1-associated genes across cancer lineages are GAPDH, 14-3-3_beta, and EGFR_pY1068. Each is linked with NDEL1 in more than 1 cancer types. Because this analysis shows association rather than direction, both NDEL1-to-partner and partner-to-NDEL1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, GAPDH grouped by NDEL1-low versus NDEL1-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (NDEL1→partner) and Y-score (partner→NDEL1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECGAPDH →+0.485+1.700.033.04432
UCEC14-3-3_beta →-0.100-3.143.019.01831
UCECEGFR_pY1068 →-0.303-3.584.004.00231
UCECJNK_pT183_Y185 →-0.217-3.584.002.00231
UCECJNK2 →+0.325+2.222<.001.01131
UCECMEK1 →+0.322+1.700.038.04231
Each partner links to its Q-omics profile. Showing the 6 strongest of 33 associations by consensus.

GAPDH by NDEL1 expression — UCEC

Box plot of GAPDH in NDEL1-low vs NDEL1-high samples in UCEC.

Explore this box plot interactively →

Exploration