NCKIPSD

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, NCKIPSD protein abundance is significantly associated with the RNA expression of many other genes, with 8,751 significant associations in total. BRCA shows the largest number of these associations.

The most reproducible NCKIPSD-associated genes across cancer lineages are IMPDH2, CELSR3, and PFKFB4. Each is linked with NCKIPSD in more than 5 cancer types. Because this analysis shows association rather than direction, both NCKIPSD-to-partner and partner-to-NCKIPSD results are reported.

Each partner links to its own Q-omics profile.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (NCKIPSD→partner) and Y-score (partner→NCKIPSD) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCAIMPDH2 →+0.727+0.193<.001<.00136
LUADCELSR3 →+1.092+0.188<.001<.00134
LSCCPFKFB4 →+0.661+0.137<.001<.00134
BRCAZBTB47 →+0.605+0.257<.001<.00134
CCRCCCKAP4 →-0.643-0.219.001.00134
BRCADALRD3 →+0.537+0.242<.001<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 8,751 associations by consensus.

Exploration