NCBP2

Across TCGA patient cohorts, NCBP2 mutation is significantly associated with the RNA expression of many other genes, with 1,609 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible NCBP2-associated genes across cancer lineages are RNU7-90P, LINC00440, and TAS2R7. Each is linked with NCBP2 in more than 1 cancer types. Because this analysis shows association rather than direction, both NCBP2-to-partner and partner-to-NCBP2 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RNU7-90P grouped by NCBP2-low versus NCBP2-high in HNSC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (NCBP2→partner) and Y-score (partner→NCBP2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
HNSC	RNU7-90P →	+0.974	+5.655	<.001	.004	3	2
CESC	LINC00440 →	+0.081	+7.164	<.001	<.001	3	2
BLCA	TAS2R7 →	+0.054	+5.788	<.001	.003	3	1
BLCA	CDKN2AIPNLP2 →	+0.145	+5.177	<.001	.007	3	1
BLCA	OR4N5 →	+0.067	+6.289	<.001	.001	3	1
BLCA	RNU6-673P →	+0.451	+5.106	<.001	.008	3	1

Each partner links to its Q-omics profile. Showing the 6 strongest of 1,609 associations by consensus.

RNU7-90P by NCBP2 expression — HNSC

Explore this box plot interactively →