NCALD

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, NCALD mutation is significantly associated with the total protein of many other genes, with 38 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible NCALD-associated genes across cancer lineages are 14-3-3_beta, EGFR_pY1068, and A-Raf_pS299. Each is linked with NCALD in more than 1 cancer types. Because this analysis shows association rather than direction, both NCALD-to-partner and partner-to-NCALD results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, 14-3-3_beta grouped by NCALD-low versus NCALD-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (NCALD→partner) and Y-score (partner→NCALD) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCEC14-3-3_beta →-0.122-3.295.004.00931
UCECEGFR_pY1068 →-0.365-2.459<.001.01831
UCECA-Raf_pS299 →-0.166-2.321.001.03431
UCECERK2 →+0.261+2.222.001.01131
UCECFoxM1 →+0.248+2.222.024.01131
UCECACC_pS79 →+0.400+2.222.006.01131
Each partner links to its Q-omics profile. Showing the 6 strongest of 38 associations by consensus.

14-3-3_beta by NCALD expression — UCEC

Box plot of 14-3-3_beta in NCALD-low vs NCALD-high samples in UCEC.

Explore this box plot interactively →

Exploration