NBPF4

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, NBPF4 mutation is significantly associated with the RNA expression of many other genes, with 104 significant associations in total. COAD shows the largest number of these associations.

The most reproducible NBPF4-associated genes across cancer lineages are RNU6-718P, RNA5SP158, and OR5M12P. Each is linked with NBPF4 in more than 1 cancer types. Because this analysis shows association rather than direction, both NBPF4-to-partner and partner-to-NBPF4 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (NBPF4→partner) and Y-score (partner→NBPF4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
COADRNU6-718P →+1.068+7.741<.001.00932
UCECRNA5SP158 →+0.311+4.727<.001.00332
COADOR5M12P →+0.164+7.741<.001.00931
COADMIR381 →+0.538+7.741<.001.00931
COADMIR96 →+0.664+7.741<.001.00931
COADRNA5SP361 →+0.497+7.741<.001.00931
Each partner links to its Q-omics profile. Showing the 6 strongest of 104 associations by consensus.

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