NAXE

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, NAXE mutation is significantly associated with the RNA expression of many other genes, with 61 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible NAXE-associated genes across cancer lineages are RNU6-1205P, MIR30B, and TBC1D26-AS1. Each is linked with NAXE in more than 1 cancer types. Because this analysis shows association rather than direction, both NAXE-to-partner and partner-to-NAXE results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RNU6-1205P grouped by NAXE-low versus NAXE-high in COAD.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (NAXE→partner) and Y-score (partner→NAXE) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
COADRNU6-1205P →+0.516+4.446.001.00631
COADMIR30B →+0.404+5.122<.001.00431
COADTBC1D26-AS1 →+0.203+4.209<.001.00931
COADKCNQ1DN →+0.089+4.717<.001.00331
COADRNU6-709P →+0.742+6.142<.001<.00131
COADRN7SL131P →+0.136+4.693.001.00731
Each partner links to its Q-omics profile. Showing the 6 strongest of 61 associations by consensus.

RNU6-1205P by NAXE expression — COAD

Box plot of RNU6-1205P in NAXE-low vs NAXE-high samples in COAD.

Explore this box plot interactively →

Exploration