NAV2-AS4

RNA — tumor vs normal
Tumor vs NormalRNABox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, NAV2-AS4 RNA differs between tumor and matched normal tissue in 8 of 18 cancer types tested, making tumor–normal expression one of NAV2-AS4’s most consistent transcriptional readouts.

The strongest signal is observed in thyroid carcinoma (THCA), where NAV2-AS4 RNA is repressed in tumor relative to normal tissue. In most cancer types NAV2-AS4 is over-expressed in tumor, although a few such as THCA and KIRC show the opposite, repressed pattern.

THCA, KIRC, and KIRP are the cancer types where NAV2-AS4 tumor–normal differential expression is most reproducible.

RNA tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in NAV2-AS4 RNA (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.
LineageGenderStageFold-changepSampling consensus
THCAMaleIII,IV−0.994<.00110view →
KIRCMaleIII,IV−0.107<.00110view →
KIRPMaleAll−0.101<.0018view →
KICHAllAll−0.124<.0017view →
LUSCMaleAll−0.046<.0017view →
PRADAllAll−0.211.0122view →
CHOLAllAll−0.202.0202view →
CHOLAllII,III,IV+0.084.0032view →
STADAllAll−0.021.0152view →
Pink = over-expressed in tumor, green = repressed in tumor. Showing the 9 strongest of 8 lineages.

NAV2-AS4–THCA

Tumor-vs-normal expression box plot for NAV2-AS4 RNA in THCA.

Open the THCA breakdown →

Exploration