NAV1

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, NAV1 mutation is significantly associated with the RNA expression of many other genes, with 2,575 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible NAV1-associated genes across cancer lineages are SLC38A8, OR2C1, and PPP6R2. Each is linked with NAV1 in more than 2 cancer types. Because this analysis shows association rather than direction, both NAV1-to-partner and partner-to-NAV1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, SLC38A8 grouped by NAV1-low versus NAV1-high in BLOOD_Lymphoma.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (NAV1→partner) and Y-score (partner→NAV1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLOOD_LymphomaSLC38A8 →+0.045+3.606.009.00232
OVARYOR2C1 →+0.034+3.544.003.00432
LARGE_INTESTINEPPP6R2 →+0.577+3.459.001<.00132
LARGE_INTESTINEARSA →+0.638+2.459<.001.00632
LARGE_INTESTINECCDC113 →+0.801+3.526<.001<.00132
LARGE_INTESTINECLUAP1 →+0.524+1.800.002.00332
Each partner links to its Q-omics profile. Showing the 6 strongest of 2,575 associations by consensus.

SLC38A8 by NAV1 expression — BLOOD_Lymphoma

Box plot of SLC38A8 in NAV1-low vs NAV1-high samples in BLOOD_Lymphoma.

Explore this box plot interactively →

Exploration