NAIF1

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, NAIF1 protein abundance is significantly associated with the RNA expression of many other genes, with 1,188 significant associations in total. LUAD shows the largest number of these associations.

The most reproducible NAIF1-associated genes across cancer lineages are HMGB1, SEC24A, and FAM71F2. Each is linked with NAIF1 in more than 1 cancer types. Because this analysis shows association rather than direction, both NAIF1-to-partner and partner-to-NAIF1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, NAIF1 versus HMGB1 in CCRCC, with a Pearson correlation of 0.44.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (NAIF1→partner) and Y-score (partner→NAIF1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
CCRCCHMGB1 →+0.609+0.351.002.00732
LSCCSEC24A →-0.330-0.274.003.00332
LUADFAM71F2 →-0.413-0.350.004.00432
BRCAJRK →+0.651+0.585.004.00232
HNSCNPIPB15 →-1.813-0.292<.001.00231
HNSCRNU1-31P →+0.800+0.334.006.00131
Each partner links to its Q-omics profile. Showing the 6 strongest of 1,188 associations by consensus.

NAIF1 vs HMGB1 — CCRCC

Per-sample scatter of NAIF1 vs HMGB1 in CCRCC (Pearson r = 0.44).

Explore this scatter interactively →

Exploration