NACA

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, NACA mutation is significantly associated with the RNA expression of many other genes, with 6,451 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible NACA-associated genes across cancer lineages are MIR4650-2, WNT5B, and RNA5SP420. Each is linked with NACA in more than 3 cancer types. Because this analysis shows association rather than direction, both NACA-to-partner and partner-to-NACA results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (NACA→partner) and Y-score (partner→NACA) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCAMIR4650-2 →+0.475+5.841.003.00334
UCECWNT5B →-0.803-2.129.001<.00134
UCECRNA5SP420 →+0.480+1.797<.001<.00134
UCECUHRF1 →+0.967+2.470<.001<.00133
UCECSCNN1B →-1.227-1.536<.001.00233
UCECPRC1 →+0.720+2.192<.001<.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 6,451 associations by consensus.

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