MYO1D

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, MYO1D mutation is significantly associated with the RNA expression of many other genes, with 379 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible MYO1D-associated genes across cancer lineages are REG3G, GPR174, and SFT2D3. Each is linked with MYO1D in more than 2 cancer types. Because this analysis shows association rather than direction, both MYO1D-to-partner and partner-to-MYO1D results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, REG3G grouped by MYO1D-low versus MYO1D-high in BLOOD_Lymphoma.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (MYO1D→partner) and Y-score (partner→MYO1D) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLOOD_LymphomaREG3G →+0.040+5.452<.001<.00133
URINARY_TRACTGPR174 →+0.358+4.700.007.00132
URINARY_TRACTSFT2D3 →+0.574+3.807.004.00532
BLOOD_LeukemiaLYG1 →+0.652+3.470<.001.00232
BLOOD_LeukemiaSGCB →+1.472+3.351<.001.00332
BLOOD_LeukemiaSTOX1 →+0.725+3.215.004.00532
Each partner links to its Q-omics profile. Showing the 6 strongest of 379 associations by consensus.

REG3G by MYO1D expression — BLOOD_Lymphoma

Box plot of REG3G in MYO1D-low vs MYO1D-high samples in BLOOD_Lymphoma.

Explore this box plot interactively →

Exploration