MTMR1

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, MTMR1 mutation is significantly associated with the RNA expression of many other genes, with 3,064 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible MTMR1-associated genes across cancer lineages are RNU6-1216P, RN7SL210P, and ATF4P1. Each is linked with MTMR1 in more than 2 cancer types. Because this analysis shows association rather than direction, both MTMR1-to-partner and partner-to-MTMR1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RNU6-1216P grouped by MTMR1-low versus MTMR1-high in DLBC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (MTMR1→partner) and Y-score (partner→MTMR1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
DLBCRNU6-1216P →+0.441+4.874<.001.00833
DLBCRN7SL210P →+0.190+4.874<.001.00832
SKCMATF4P1 →+0.031+3.180<.001.00432
SKCMHCFC2P1 →+0.100+2.915<.001.00832
BLCARNU6-177P →+0.291+3.623.007.00432
BLCARNU6-62P →+0.637+3.069<.001.00832
Each partner links to its Q-omics profile. Showing the 6 strongest of 3,064 associations by consensus.

RNU6-1216P by MTMR1 expression — DLBC

Box plot of RNU6-1216P in MTMR1-low vs MTMR1-high samples in DLBC.

Explore this box plot interactively →

Exploration