MT3

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, MT3 mutation is significantly associated with the total protein of many other genes, with 10 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible MT3-associated genes across cancer lineages are PRDX1, JNK_pT183_Y185, and p90 RSK. Each is linked with MT3 in more than 1 cancer types. Because this analysis shows association rather than direction, both MT3-to-partner and partner-to-MT3 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, PRDX1 grouped by MT3-low versus MT3-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (MT3→partner) and Y-score (partner→MT3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECPRDX1 →+0.241+2.459.015.01932
UCECJNK_pT183_Y185 →-0.171-3.000.035.03631
UCECp90 RSK →+0.209+3.179.023.01031
UCECATM →-0.460-3.584.035.00231
UCECC-Raf_pS338 →-0.100-2.950.011.03631
UCECJNK2 →+0.216+3.584.024.00221
Each partner links to its Q-omics profile. Showing the 6 strongest of 10 associations by consensus.

PRDX1 by MT3 expression — UCEC

Box plot of PRDX1 in MT3-low vs MT3-high samples in UCEC.

Explore this box plot interactively →

Exploration