Across TCGA pan-cancer cohorts, MT-TE RNA differs between tumor and matched normal tissue in 10 of 18 cancer types tested, making tumor–normal expression one of MT-TE’s most consistent transcriptional readouts.
The strongest signal is observed in kidney renal clear cell carcinoma (KIRC), where MT-TE RNA is repressed in tumor relative to normal tissue. In most cancer types MT-TE is over-expressed in tumor, although a few such as KIRC and HNSC show the opposite, repressed pattern.
KIRC, HNSC, and BLCA are the cancer types where MT-TE tumor–normal differential expression is most reproducible.
RNA tumor vs normal associations by lineage
Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in MT-TE RNA (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.