MT-ND4L

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, MT-ND4L mutation is significantly associated with the RNA expression of many other genes, with 7 significant associations in total. LUNG_SCLC shows the largest number of these associations.

The most reproducible MT-ND4L-associated genes across cancer lineages are ASZ1, PRSS38, and CYP4Z1. Each is linked with MT-ND4L in more than 1 cancer types. Because this analysis shows association rather than direction, both MT-ND4L-to-partner and partner-to-MT-ND4L results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (MT-ND4L→partner) and Y-score (partner→MT-ND4L) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUNG_SCLCASZ1 →+0.034+2.847.002.00931
LUNG_SCLCPRSS38 →+0.033+3.794<.001.00331
LUNG_SCLCCYP4Z1 →+0.178+3.849<.001<.00131
LUNG_SCLCC17orf98 →+0.074+2.635.001.00731
LUNG_SCLCGSTT4 →+0.010+2.684<.001.00731
LUNG_SCLCSPINK13 →+0.119+3.404.001.00621
Each partner links to its Q-omics profile. Showing the 6 strongest of 7 associations by consensus.

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