MT-CO1

RNA — tumor vs normal
Tumor vs NormalRNABox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, MT-CO1 RNA differs between tumor and matched normal tissue in 12 of 18 cancer types tested, making tumor–normal expression one of MT-CO1’s most consistent transcriptional readouts.

The strongest signal is observed in kidney renal clear cell carcinoma (KIRC), where MT-CO1 RNA is repressed in tumor relative to normal tissue. In most cancer types MT-CO1 is over-expressed in tumor, although a few such as KIRC and HNSC show the opposite, repressed pattern.

KIRC, HNSC, and COAD are the cancer types where MT-CO1 tumor–normal differential expression is most reproducible.

RNA tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in MT-CO1 RNA (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.
LineageGenderStageFold-changepSampling consensus
KIRCFemaleIII,IV−0.791<.00112view →
HNSCAllIV−1.045<.0019view →
COADFemaleII,III,IV−0.922<.0017view →
KICHFemaleII,III,IV+1.541<.0015view →
KIRPAllII,III,IV−1.053.0035view →
LUSCMaleAll−0.670<.0014view →
LIHCAllAll−0.474<.0014view →
BRCAAllAll−0.233.0014view →
CHOLAllAll−0.845.0413view →
UCECAllAll−0.426.0412view →
LUADAllAll−0.348.0202view →
PRADAllAll+0.334.0152view →
Pink = over-expressed in tumor, green = repressed in tumor. Showing the 12 strongest of 12 lineages.

Exploration