MT-ATP6

RNA — tumor vs normal
Tumor vs NormalRNABox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, MT-ATP6 RNA differs between tumor and matched normal tissue in 14 of 18 cancer types tested, making tumor–normal expression one of MT-ATP6’s most consistent transcriptional readouts.

The strongest signal is observed in kidney renal clear cell carcinoma (KIRC), where MT-ATP6 RNA is repressed in tumor relative to normal tissue. In most cancer types MT-ATP6 is over-expressed in tumor, although a few such as KIRC and KIRP show the opposite, repressed pattern.

KIRC, KIRP, and LIHC are the cancer types where MT-ATP6 tumor–normal differential expression is most reproducible.

RNA tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in MT-ATP6 RNA (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.
LineageGenderStageFold-changepSampling consensus
KIRCFemaleIII,IV−0.924<.00112view →
KIRPAllII,III,IV−1.049<.0019view →
LIHCMaleAll−0.881<.0016view →
BRCAAllAll−0.432<.0016view →
KICHFemaleAll+1.420<.0014view →
CHOLAllAll−0.655.0104view →
READFemaleAll+0.810<.0012view →
THCAMaleIII,IV+0.521.0332view →
LUSCMaleAll−0.472.0022view →
PRADAllAll+0.416.0042view →
HNSCFemaleIV−0.906.0351view →
LUADAllAll−0.474.0251view →
Pink = over-expressed in tumor, green = repressed in tumor. Showing the 12 strongest of 14 lineages.

Exploration