MS4A13

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, MS4A13 mutation is significantly associated with the RNA expression of many other genes, with 1,182 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible MS4A13-associated genes across cancer lineages are RNU1-62P, UBE2Q2P10, and MIR1261. Each is linked with MS4A13 in more than 1 cancer types. Because this analysis shows association rather than direction, both MS4A13-to-partner and partner-to-MS4A13 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (MS4A13→partner) and Y-score (partner→MS4A13) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
CESCRNU1-62P →+0.261+5.539<.001.00432
CESCUBE2Q2P10 →+0.055+5.010<.001.00932
LUADMIR1261 →+0.315+4.554<.001.00932
UCECRNA5SP327 →+0.212+2.720.001.00432
UCECRNU4-58P →+0.196+2.433.002.00932
UCECRNU6-1155P →+0.099+4.153.007.00532
Each partner links to its Q-omics profile. Showing the 6 strongest of 1,182 associations by consensus.

Exploration