MPRIP

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, MPRIP protein abundance is significantly associated with the RNA expression of many other genes, with 16,219 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible MPRIP-associated genes across cancer lineages are VSTM4, PRKG1, and TIMP3. Each is linked with MPRIP in more than 8 cancer types. Because this analysis shows association rather than direction, both MPRIP-to-partner and partner-to-MPRIP results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, MPRIP versus VSTM4 in UCEC, with a Pearson correlation of 0.43.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (MPRIP→partner) and Y-score (partner→MPRIP) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECVSTM4 →+1.137+0.366<.001<.00139
CCRCCPRKG1 →+1.028+0.419<.001<.00139
COADTIMP3 →+1.472+0.315<.001<.00138
COADMYL9 →+1.423+0.294<.001<.00138
COADAEBP1 →+1.904+0.290<.001<.00138
COADECM2 →+0.800+0.181<.001<.00138
Each partner links to its Q-omics profile. Showing the 6 strongest of 16,219 associations by consensus.

MPRIP vs VSTM4 — UCEC

Per-sample scatter of MPRIP vs VSTM4 in UCEC (Pearson r = 0.43).

Explore this scatter interactively →

Exploration