MOS

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, MOS mutation is significantly associated with the RNA expression of many other genes, with 11 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible MOS-associated genes across cancer lineages are USP17L17, FBXW10, and NUPR2. Each is linked with MOS in more than 1 cancer types. Because this analysis shows association rather than direction, both MOS-to-partner and partner-to-MOS results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, USP17L17 grouped by MOS-low versus MOS-high in SKIN.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (MOS→partner) and Y-score (partner→MOS) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
SKINUSP17L17 →+0.013+6.022<.001.00131
LARGE_INTESTINEFBXW10 →+0.282+3.491<.001.00431
LARGE_INTESTINENUPR2 →+0.205+2.688.001.00831
BLOOD_LymphomaPCARE →+0.038+4.523<.001.00431
BLOOD_LymphomaKRTAP9-2 →+0.032+5.247<.001.00131
BLOOD_LymphomaIFNL4 →+0.018+4.191.004.00731
Each partner links to its Q-omics profile. Showing the 6 strongest of 11 associations by consensus.

USP17L17 by MOS expression — SKIN

Box plot of USP17L17 in MOS-low vs MOS-high samples in SKIN.

Explore this box plot interactively →

Exploration