MMRN2

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, MMRN2 mutation is significantly associated with the RNA expression of many other genes, with 136 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible MMRN2-associated genes across cancer lineages are ACER1, OR1Q1, and TEKT1. Each is linked with MMRN2 in more than 1 cancer types. Because this analysis shows association rather than direction, both MMRN2-to-partner and partner-to-MMRN2 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, ACER1 grouped by MMRN2-low versus MMRN2-high in LARGE_INTESTINE.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (MMRN2→partner) and Y-score (partner→MMRN2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LARGE_INTESTINEACER1 →+0.075+2.086<.001.00932
BLOOD_LeukemiaOR1Q1 →+0.367+3.714<.001.00531
BLOOD_LeukemiaTEKT1 →+0.272+3.959<.001.00531
BLOOD_LeukemiaOR13J1 →+0.164+4.096<.001.00131
BLOOD_LeukemiaTMEM196 →+0.029+3.289<.001.00931
BLOOD_LeukemiaNKX2-6 →+0.325+4.201<.001.00131
Each partner links to its Q-omics profile. Showing the 6 strongest of 136 associations by consensus.

ACER1 by MMRN2 expression — LARGE_INTESTINE

Box plot of ACER1 in MMRN2-low vs MMRN2-high samples in LARGE_INTESTINE.

Explore this box plot interactively →

Exploration