MMP17

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, MMP17 mutation is significantly associated with the RNA expression of many other genes, with 21 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible MMP17-associated genes across cancer lineages are CT45A6, OR4D6, and KCNK18. Each is linked with MMP17 in more than 1 cancer types. Because this analysis shows association rather than direction, both MMP17-to-partner and partner-to-MMP17 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (MMP17→partner) and Y-score (partner→MMP17) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UPPER_AERODIGESTIVE_TRACTCT45A6 →+0.045+4.357<.001.00631
BLOOD_LymphomaOR4D6 →+0.018+5.209.002.00531
BLOOD_LymphomaKCNK18 →+0.019+5.209<.001.00531
SKINOR1L3 →+0.029+5.415<.001.00431
SKINUCN3 →+0.055+4.977<.001.00731
SKINFAM47C →+0.006+4.977<.001.00731
Each partner links to its Q-omics profile. Showing the 6 strongest of 21 associations by consensus.

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